| 3D profile-to-3D profile alignment | http://edamontology.org/operation_0299 | 3D profile-to-3D profile alignment | |
| 3D profile alignment (multiple) | http://edamontology.org/operation_0299 | 3D profile-to-3D profile alignment | |
| Multiple 3D profile alignment construction | http://edamontology.org/operation_0299 | 3D profile-to-3D profile alignment | |
| Structural profile alignment construction (multiple) | http://edamontology.org/operation_0299 | 3D profile-to-3D profile alignment | |
| Structural profile alignment | http://edamontology.org/operation_0299 | 3D profile-to-3D profile alignment | |
| Pairwise structural (3D) profile alignment construction | http://edamontology.org/operation_0513 | 3D profile-to-3D profile alignment (pairwise) | |
| Structural profile alignment generation (pairwise) | http://edamontology.org/operation_0513 | 3D profile-to-3D profile alignment (pairwise) | |
| 3D profile-to-3D profile alignment (pairwise) | http://edamontology.org/operation_0513 | 3D profile-to-3D profile alignment (pairwise) | |
| Structural (3D) profile alignment (pairwise) | http://edamontology.org/operation_0513 | 3D profile-to-3D profile alignment (pairwise) | |
| Structural profile alignment construction (pairwise) | http://edamontology.org/operation_0513 | 3D profile-to-3D profile alignment (pairwise) | |
| A2M | http://edamontology.org/format_3281 | A2M | |
| aaindex | http://edamontology.org/format_1504 | aaindex | |
| AAindex ID | http://edamontology.org/data_1128 | AAindex ID | |
| AB1 | http://edamontology.org/format_3000 | AB1 | |
| ABCD format | http://edamontology.org/format_3708 | ABCD format | |
| ABCD | http://edamontology.org/format_3708 | ABCD format | |
| ABI | http://edamontology.org/format_1628 | ABI | |
| Gene prediction (ab-initio) | http://edamontology.org/operation_3662 | Ab-initio gene prediction | |
| Ab-initio gene prediction | http://edamontology.org/operation_3662 | Ab-initio gene prediction | |
| Ab initio structure prediction | http://edamontology.org/operation_0476 | Ab initio structure prediction | |
| de novo structure prediction | http://edamontology.org/operation_0476 | Ab initio structure prediction | |
| Ab initio structure prediction | http://edamontology.org/topic_0174 | Ab initio structure prediction | |
| ABS identifier | http://edamontology.org/data_2741 | ABS ID | |
| ABS ID | http://edamontology.org/data_2741 | ABS ID | |
| Abstract | http://edamontology.org/data_2849 | Abstract | |
| Protein solvent accessibility calculation | http://edamontology.org/operation_0384 | Accessible surface calculation | |
| Accessible surface calculation | http://edamontology.org/operation_0384 | Accessible surface calculation | |
| Accession | http://edamontology.org/data_2091 | Accession | |
| ACE | http://edamontology.org/format_3001 | ACE | |
| acedb | http://edamontology.org/format_1923 | acedb | |
