| Protein active sites | http://edamontology.org/topic_3533 | Protein active sites | |
| Protein and peptide identification | http://edamontology.org/topic_0767 | Protein and peptide identification | |
| Protein and peptide identification | http://edamontology.org/topic_0121 | Proteomics | |
| Protein binding sites | http://edamontology.org/topic_3534 | Protein binding sites | |
| Protein bioinformatics | http://edamontology.org/topic_0078 | Proteins | |
| Protein chemical modifications | http://edamontology.org/topic_3537 | Protein chemical modifications | |
| Protein chemical modifications | http://edamontology.org/topic_0601 | Protein modifications | |
| Protein classification | http://edamontology.org/topic_0595 | Protein classification | |
| Protein cleavage sites | http://edamontology.org/topic_3536 | Protein cleavage sites | |
| Protein cleavage sites | http://edamontology.org/topic_3534 | Protein binding sites | |
| Protein cleavage sites and proteolysis | http://edamontology.org/topic_0141 | Protein cleavage sites and proteolysis | |
| Protein databases | http://edamontology.org/topic_2225 | Protein databases | |
| Protein databases | http://edamontology.org/topic_0078 | Proteins | |
| Protein data resources | http://edamontology.org/topic_2225 | Protein databases | |
| Protein design | http://edamontology.org/topic_0130 | Protein folding, stability and design | |
| Protein design | http://edamontology.org/topic_0150 | Protein design | |
| Protein disordered structure | http://edamontology.org/topic_3538 | Protein disordered structure | |
| Protein-DNA interaction | http://edamontology.org/topic_0128 | Protein interactions | |
| Protein domains | http://edamontology.org/topic_3539 | Protein domains | |
| Protein domains | http://edamontology.org/topic_0736 | Protein folds and structural domains | |
| Protein-drug interactions | http://edamontology.org/topic_3515 | Protein-drug interactions | |
| Protein-drug interactions | http://edamontology.org/topic_3514 | Protein-ligand interactions | |
| Protein dynamics | http://edamontology.org/topic_0176 | Molecular dynamics | |
| Protein expression | http://edamontology.org/topic_0121 | Proteomics | |
| Protein expression | http://edamontology.org/topic_0108 | Protein expression | |
| Protein families | http://edamontology.org/topic_0724 | Protein families | |
| Protein families | http://edamontology.org/topic_0623 | Gene and protein families | |
| Protein feature detection | http://edamontology.org/topic_3074 | Protein feature detection | |
| Protein features (disordered structure) | http://edamontology.org/topic_3538 | Protein disordered structure | |
| Protein features (secondary structure) | http://edamontology.org/topic_3542 | Protein secondary structure | |
