| HMMs | http://edamontology.org/topic_0160 | Sequence sites, features and motifs | |
| Sequence motifs | http://edamontology.org/topic_0160 | Sequence sites, features and motifs | |
| Functional sites | http://edamontology.org/topic_0160 | Sequence sites, features and motifs | |
| Sequence database search | http://edamontology.org/topic_0163 | Sequence database search | |
| Sequence clustering | http://edamontology.org/topic_0164 | Sequence clustering | |
| Sequence clusters | http://edamontology.org/topic_0164 | Sequence clustering | |
| Structural motifs | http://edamontology.org/topic_0166 | Protein structural motifs and surfaces | |
| Protein surfaces | http://edamontology.org/topic_0166 | Protein structural motifs and surfaces | |
| Protein 3D motifs | http://edamontology.org/topic_0166 | Protein structural motifs and surfaces | |
| Protein structural features | http://edamontology.org/topic_0166 | Protein structural motifs and surfaces | |
| Protein structural motifs | http://edamontology.org/topic_0166 | Protein structural motifs and surfaces | |
| Protein structural motifs and surfaces | http://edamontology.org/topic_0166 | Protein structural motifs and surfaces | |
| Structural profiles | http://edamontology.org/topic_0167 | Structural (3D) profiles | |
| Structural (3D) profiles | http://edamontology.org/topic_0167 | Structural (3D) profiles | |
| Protein structure prediction | http://edamontology.org/topic_0172 | Protein structure prediction | |
| Nucleic acid structure prediction | http://edamontology.org/topic_0173 | Nucleic acid structure prediction | |
| Ab initio structure prediction | http://edamontology.org/topic_0174 | Ab initio structure prediction | |
| Homology modelling | http://edamontology.org/topic_0175 | Homology modelling | |
| Molecular dynamics | http://edamontology.org/topic_0176 | Molecular dynamics | |
| Molecular motions | http://edamontology.org/topic_0176 | Molecular dynamics | |
| Molecular flexibility | http://edamontology.org/topic_0176 | Molecular dynamics | |
| Protein dynamics | http://edamontology.org/topic_0176 | Molecular dynamics | |
| Molecular docking | http://edamontology.org/topic_0177 | Molecular docking | |
| Protein secondary structure prediction | http://edamontology.org/topic_0178 | Protein secondary structure prediction | |
| Protein tertiary structure prediction | http://edamontology.org/topic_0179 | Protein tertiary structure prediction | |
| Protein fold recognition | http://edamontology.org/topic_0180 | Protein fold recognition | |
| Sequence alignment | http://edamontology.org/topic_0182 | Sequence alignment | |
| Structure alignment | http://edamontology.org/topic_0183 | Structure alignment | |
| Threading | http://edamontology.org/topic_0184 | Threading | |
| Sequence-structure alignment | http://edamontology.org/topic_0184 | Threading | |